Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_cn00030 | Not Available | Positive | 2394368 - 2394496 | 4862.81 |
| nitrogen assimilation regulatory protein ntrx | Rifp1Sym_cn00040 | Not Available | Positive | 2394640 - 2395092 | 17581.7 |
| putative membrane protein | Rifp1Sym_cn00050 | Not Available | Positive | 2395682 - 2396965 | 46854.9 |
| integral membrane protein | Rifp1Sym_cn00060 | Not Available | Positive | 2396962 - 2398491 | 57138.4 |
| putative fad-dependent dehydrogenase | Rifp1Sym_cn00070 | Not Available | Positive | 2398491 - 2399813 | 49657.7 |
| short-chain dehydrogenase/reductase sdr | Rifp1Sym_cn00080 | Not Available | Positive | 2399810 - 2400547 | 27132.2 |
| hypothetical protein | Rifp1Sym_cn00090 | Not Available | Positive | 2400586 - 2402295 | 64109.3 |
| aconitate hydratase | Rifp1Sym_cn00100 | Not Available | Positive | 2402480 - 2405047 | 92473.0 |
| atp-sulfurylase | Rifp1Sym_cn00110 | Not Available | Negative | 2405213 - 2406403 | 43895.6 |
| metal dependent phosphohydrolase | Rifp1Sym_cn00120 | Not Available | Negative | 2406836 - 2407750 | 33759.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
