Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_cm00120 | Not Available | Positive | 2385296 - 2385970 | 25199.4 |
| multi-sensor signal transduction histidine kinase | Rifp1Sym_cm00130 | Not Available | Positive | 2386018 - 2386317 | 11105.1 |
| putative signal transduction histidine kinase | Rifp1Sym_cm00140 | Not Available | Positive | 2386304 - 2387296 | 36681.5 |
| nitrogen regulation protein ntry | Rifp1Sym_cm00150 | Not Available | Positive | 2387378 - 2387944 | 21328.8 |
| nitrogen regulation protein ntry | Rifp1Sym_cm00160 | Not Available | Positive | 2387869 - 2388123 | 9500.53 |
| nitrogen assimilation regulatory protein ntrx | Rifp1Sym_cm00170 | Not Available | Positive | 2388120 - 2389487 | 51535.6 |
| k+ transporter, nad-binding component | Rifp1Sym_cm00180 | Not Available | Positive | 2389651 - 2391024 | 50296.6 |
| potassium uptake protein trkh | Rifp1Sym_cm00190 | Not Available | Positive | 2391039 - 2392490 | 52322.5 |
| hypothetical protein | Rifp1Sym_cn00010 | Not Available | Positive | 2392909 - 2393226 | 11355.6 |
| adp-ribose pyrophosphatase | Rifp1Sym_cn00020 | Not Available | Negative | 2393532 - 2394326 | 30241.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
