Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_cm00020 | Not Available | Positive | 2375988 - 2376257 | 10003.5 |
| hypothetical protein | Rifp1Sym_cm00030 | Not Available | Positive | 2376283 - 2376504 | 8554.88 |
| dna topoisomerase 1 | Rifp1Sym_cm00040 | Not Available | Negative | 2377145 - 2379439 | 86334.6 |
| smg-like protein | Rifp1Sym_cm00050 | Not Available | Negative | 2379510 - 2379986 | 18303.5 |
| nucleotide-binding protein | Rifp1Sym_cm00060 | Not Available | Negative | 2380014 - 2381138 | 39313.1 |
| lysm domain protein | Rifp1Sym_cm00070 | Not Available | Negative | 2381169 - 2382215 | 38837.0 |
| peptide deformylase | Rifp1Sym_cm00080 | Not Available | Positive | 2382450 - 2383034 | 21912.5 |
| methionyl-trna formyltransferase | Rifp1Sym_cm00090 | Not Available | Positive | 2383157 - 2384095 | 33401.4 |
| ribosomal rna small subunit methyltransferase b | Rifp1Sym_cm00100 | Not Available | Positive | 2384092 - 2384637 | 20498.2 |
| ribosomal rna small subunit methyltransferase b | Rifp1Sym_cm00110 | Not Available | Positive | 2384634 - 2385299 | 24453.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
