Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_cl00140 | Not Available | Positive | 2363095 - 2363295 | 7357.86 |
| asparagine synthetase | Rifp1Sym_cl00150 | Not Available | Positive | 2363495 - 2365045 | 59706.2 |
| putative glycosyltransferase | Rifp1Sym_cl00160 | Not Available | Positive | 2365063 - 2366253 | 44610.2 |
| putative trna/rrna methyltransferase | Rifp1Sym_cl00170 | Not Available | Negative | 2366237 - 2366494 | 9444.35 |
| dihydroorotate dehydrogenase | Rifp1Sym_cl00180 | Not Available | Positive | 2366692 - 2367705 | 36162.5 |
| cyclic nucleotide-binding protein | Rifp1Sym_cl00190 | Not Available | Positive | 2367777 - 2369036 | 46613.7 |
| putative permease, member of the purr regulon | Rifp1Sym_cl00200 | Not Available | Negative | 2369033 - 2370055 | 36358.0 |
| hypothetical protein | Rifp1Sym_cl00210 | Not Available | Negative | 2370059 - 2370487 | 16132.5 |
| methylthioribulose-1-phosphate dehydratase | Rifp1Sym_cl00220 | Not Available | Positive | 2370536 - 2371198 | 24982.5 |
| hypothetical protein | Rifp1Sym_cm00010 | Not Available | Negative | 2375722 - 2375913 | 6672.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
