Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 4,6-dehydratase | Rifp1Sym_cl00040 | Not Available | Positive | 2352818 - 2354824 | 74375.7 |
| putative protease | Rifp1Sym_cl00050 | Not Available | Negative | 2354834 - 2355298 | 16066.4 |
| hypothetical protein | Rifp1Sym_cl00060 | Not Available | Negative | 2355310 - 2356152 | 30517.1 |
| carboxy-terminal-processing protease | Rifp1Sym_cl00070 | Not Available | Negative | 2356156 - 2357490 | 47618.5 |
| peptidase m23b | Rifp1Sym_cl00080 | Not Available | Negative | 2357487 - 2358767 | 48244.3 |
| 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | Rifp1Sym_cl00090 | Not Available | Negative | 2358767 - 2360317 | 57185.6 |
| transcriptional regulator, arsr family | Rifp1Sym_cl00100 | Not Available | Positive | 2360537 - 2360899 | 13484.2 |
| rhodanese family sulfurtransferase | Rifp1Sym_cl00110 | Not Available | Positive | 2361026 - 2361442 | 15310.7 |
| protein-export protein secb | Rifp1Sym_cl00120 | Not Available | Positive | 2361473 - 2361943 | 17464.6 |
| nad(p)+ dependent glycerol-3-phosphate dehydrogenase | Rifp1Sym_cl00130 | Not Available | Positive | 2361950 - 2362957 | 35574.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
