Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coenzyme pqq synthesis protein e | Rifp1Sym_ck00110 | Not Available | Positive | 2339875 - 2341986 | 77477.6 |
| protoporphyrinogen oxidase | Rifp1Sym_ck00120 | Not Available | Positive | 2341983 - 2343392 | 51368.7 |
| hypothetical protein | Rifp1Sym_ck00130 | Not Available | Positive | 2343407 - 2343736 | 12749.4 |
| signal transduction histidine-protein kinase atos | Rifp1Sym_ck00140 | Not Available | Positive | 2343727 - 2346345 | 98322.4 |
| transcriptional regulatory protein zrar | Rifp1Sym_ck00150 | Not Available | Positive | 2346342 - 2347751 | 52189.1 |
| flagellar protein flij | Rifp1Sym_ck00160 | Not Available | Negative | 2347771 - 2348208 | 16961.9 |
| flagellum-specific atp synthase | Rifp1Sym_ck00170 | Not Available | Negative | 2348486 - 2349649 | 41710.2 |
| methyltransferase type 11 | Rifp1Sym_cl00010 | Not Available | Negative | 2350649 - 2351278 | 24350.2 |
| putative polysaccharide biosynthesis protein | Rifp1Sym_cl00020 | Not Available | Negative | 2351306 - 2352097 | 27981.1 |
| putative polysaccharide biosynthesis protein epsc | Rifp1Sym_cl00030 | Not Available | Negative | 2352173 - 2352736 | 20640.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
