Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative glycine dehydrogenase | Rifp1Sym_ac00530 | Not Available | Negative | 223684 - 225138 | 52373.9 |
| glycine cleavage system h protein | Rifp1Sym_ac00540 | Not Available | Negative | 225098 - 225490 | 14073.0 |
| aminomethyltransferase | Rifp1Sym_ac00550 | Not Available | Negative | 225534 - 226643 | 40612.1 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | Rifp1Sym_ac00560 | Not Available | Negative | 227070 - 228287 | 44119.4 |
| 2-octaprenyl-6-methoxyphenol hydroxylase | Rifp1Sym_ac00570 | Not Available | Negative | 228284 - 229507 | 44436.7 |
| xaa-pro aminopeptidase | Rifp1Sym_ac00580 | Not Available | Negative | 229509 - 230849 | 50511.7 |
| yeca family protein | Rifp1Sym_ac00590 | Not Available | Negative | 230803 - 231369 | 20789.4 |
| hypothetical protein | Rifp1Sym_ac00600 | Not Available | Positive | 231368 - 231700 | 12152.5 |
| hypothetical protein | Rifp1Sym_ac00610 | Not Available | Positive | 231697 - 232011 | 11726.2 |
| 5-formyltetrahydrofolate cyclo-ligase | Rifp1Sym_ac00620 | Not Available | Positive | 232214 - 232843 | 24080.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
