Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_ci00050 | Not Available | Negative | 2287550 - 2288488 | 34926.0 |
| putative n-acetylmannosaminyltransferase | Rifp1Sym_ci00060 | Not Available | Negative | 2288628 - 2289380 | 28204.2 |
| galactosyl transferase cpse | Rifp1Sym_ci00070 | Not Available | Negative | 2289435 - 2290850 | 53456.0 |
| oxygen-independent coproporphyrinogen-iii oxidase | Rifp1Sym_ci00080 | Not Available | Negative | 2291118 - 2292524 | 53356.4 |
| hypothetical protein | Rifp1Sym_ci00090 | Not Available | Negative | 2292533 - 2292862 | 12689.1 |
| modification methylase, hemk family | Rifp1Sym_ci00100 | Not Available | Negative | 2292919 - 2293815 | 32989.2 |
| hth-type transcriptional regulator iscr | Rifp1Sym_ci00110 | Not Available | Negative | 2293959 - 2294516 | 20206.1 |
| hypothetical protein | Rifp1Sym_ci00120 | Not Available | Negative | 2294584 - 2295261 | 26150.9 |
| hypothetical protein | Rifp1Sym_ci00130 | Not Available | Negative | 2294925 - 2295749 | 30156.0 |
| dna polymerase iv | Rifp1Sym_ci00140 | Not Available | Negative | 2295831 - 2297087 | 46252.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
