Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | Rifp1Sym_ch00210 | Not Available | Positive | 2277039 - 2277860 | 29514.2 |
| arsenate reductase | Rifp1Sym_ch00220 | Not Available | Positive | 2277923 - 2278270 | 13223.9 |
| succinyl-diaminopimelate desuccinylase | Rifp1Sym_ch00230 | Not Available | Positive | 2278270 - 2279397 | 40957.4 |
| hypothetical protein | Rifp1Sym_ch00240 | Not Available | Positive | 2279445 - 2279906 | 17548.8 |
| hypothetical protein | Rifp1Sym_ch00250 | Not Available | Positive | 2280133 - 2280681 | 19337.6 |
| riboflavin synthase alpha chain | Rifp1Sym_ch00260 | Not Available | Positive | 2280685 - 2282526 | 68912.5 |
| general secretion pathway protein d | Rifp1Sym_ci00010 | Not Available | Positive | 2282770 - 2284347 | 56639.2 |
| general secretion pathway protein e | Rifp1Sym_ci00020 | Not Available | Positive | 2284365 - 2285918 | 57774.6 |
| general secretion pathway protein f | Rifp1Sym_ci00030 | Not Available | Positive | 2285921 - 2287138 | 44361.1 |
| hypothetical protein | Rifp1Sym_ci00040 | Not Available | Positive | 2287152 - 2287496 | 12822.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
