Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfoxide reductase, heme-binding subunit | Rifp1Sym_cf00110 | Not Available | Positive | 2222605 - 2223342 | 27768.5 |
| hypothetical protein | Rifp1Sym_cf00120 | Not Available | Negative | 2223354 - 2223476 | 4569.43 |
| putative leucine/isoleucine/valine-binding protein | Rifp1Sym_cf00130 | Not Available | Positive | 2224371 - 2225546 | 41955.5 |
| methyl-accepting chemotaxis sensory transducer | Rifp1Sym_cf00140 | Not Available | Positive | 2226330 - 2227784 | 52518.3 |
| protein-export membrane protein secf | Rifp1Sym_cf00150 | Not Available | Negative | 2228019 - 2228957 | 33670.5 |
| protein-export membrane protein secd | Rifp1Sym_cf00160 | Not Available | Negative | 2228973 - 2230826 | 66983.2 |
| preprotein translocase, yajc subunit | Rifp1Sym_cf00170 | Not Available | Negative | 2230964 - 2231293 | 11680.4 |
| queuine trna-ribosyltransferase | Rifp1Sym_cf00180 | Not Available | Negative | 2231435 - 2232529 | 41008.2 |
| s-adenosylmethionine:trna ribosyltransferase-isomerase | Rifp1Sym_cf00190 | Not Available | Negative | 2232787 - 2233878 | 40579.6 |
| hypothetical protein | Rifp1Sym_cf00200 | Not Available | Positive | 2234014 - 2234895 | 32213.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
