Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative gcn5 n-acetyltransferase | Rifp1Sym_ce00020 | Not Available | Negative | 2191851 - 2192330 | 17791.2 |
| cupin 4 family protein | Rifp1Sym_ce00030 | Not Available | Negative | 2192281 - 2193453 | 44956.0 |
| adenylosuccinate lyase | Rifp1Sym_ce00040 | Not Available | Negative | 2193779 - 2195146 | 50936.9 |
| squalene synthase hpnd | Rifp1Sym_ce00050 | Not Available | Negative | 2195469 - 2196305 | 32027.5 |
| phosphoglycolate phosphatase 2 | Rifp1Sym_ce00060 | Not Available | Negative | 2196293 - 2196946 | 24045.6 |
| 3-demethylubiquinone-9 3-methyltransferase | Rifp1Sym_ce00070 | Not Available | Negative | 2196943 - 2197656 | 26299.5 |
| 5-methylthioadenosine/s-adenosylhomocysteine deaminase | Rifp1Sym_ce00080 | Not Available | Negative | 2197861 - 2199180 | 47681.9 |
| methylthioribose-1-phosphate isomerase | Rifp1Sym_ce00090 | Not Available | Positive | 2199213 - 2200310 | 38666.3 |
| dna gyrase subunit a | Rifp1Sym_ce00100 | Not Available | Positive | 2200441 - 2203026 | 95862.5 |
| phosphoserine aminotransferase | Rifp1Sym_ce00110 | Not Available | Positive | 2203125 - 2204207 | 39004.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
