Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative signaling protein | Rifp1Sym_cd00040 | Not Available | Negative | 2170340 - 2172805 | 92317.1 |
| phosphate-binding protein | Rifp1Sym_cd00050 | Not Available | Negative | 2172802 - 2173824 | 37879.6 |
| phosphate-specific outer membrane porin oprp | Rifp1Sym_cd00060 | Not Available | Negative | 2173745 - 2175274 | 56386.2 |
| hypothetical protein | Rifp1Sym_cd00070 | Not Available | Negative | 2175286 - 2175735 | 16980.3 |
| sensory histidine kinase atos | Rifp1Sym_cd00080 | Not Available | Positive | 2176664 - 2179216 | 95408.2 |
| response regulator ttrr | Rifp1Sym_cd00090 | Not Available | Positive | 2179219 - 2179845 | 22992.0 |
| putative mfs-type transporter | Rifp1Sym_cd00100 | Not Available | Positive | 2179845 - 2180372 | 19135.5 |
| putative mfs-type transporter | Rifp1Sym_cd00110 | Not Available | Positive | 2180327 - 2181145 | 29904.3 |
| protein of unknown function duf336 | Rifp1Sym_cd00120 | Not Available | Negative | 2181187 - 2181807 | 22733.4 |
| trna (cmo5u34)-methyltransferase | Rifp1Sym_cd00130 | Not Available | Positive | 2182100 - 2182615 | 19304.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
