Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative trap dicarboxylate transporter | Rifp1Sym_cb00230 | Not Available | Positive | 2140287 - 2141285 | 36413.0 |
| cupin 2 conserved barrel domain protein | Rifp1Sym_cb00240 | Not Available | Positive | 2141292 - 2141630 | 12507.9 |
| trap-type c4-dicarboxylate transport system, small permease component | Rifp1Sym_cb00250 | Not Available | Positive | 2141692 - 2142180 | 18264.8 |
| putative trap transporter large permease protein | Rifp1Sym_cb00260 | Not Available | Positive | 2142171 - 2143454 | 46289.8 |
| hypothetical protein | Rifp1Sym_cb00270 | Not Available | Positive | 2143458 - 2143745 | 10534.5 |
| hypothetical protein | Rifp1Sym_cb00280 | Not Available | Negative | 2143742 - 2143927 | 6792.17 |
| hypothetical protein | Rifp1Sym_cb00290 | Not Available | Negative | 2143896 - 2144192 | 10602.0 |
| hypothetical protein | Rifp1Sym_cc00010 | Not Available | Positive | 2144402 - 2145070 | 24723.5 |
| sulfur oxidation protein soxb | Rifp1Sym_cc00020 | Not Available | Negative | 2145117 - 2146946 | 66875.7 |
| putative response regulator fixj | Rifp1Sym_cc00030 | Not Available | Negative | 2147280 - 2147945 | 24651.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
