Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | Rifp1Sym_aa00080 | Not Available | Negative | 4763 - 6238 | 53826.4 |
| phosphonate abc transporter phosphate-binding periplasmic component | Rifp1Sym_aa00090 | Not Available | Negative | 6252 - 7121 | 32361.2 |
| acriflavin resistance protein | Rifp1Sym_aa00100 | Not Available | Negative | 7346 - 10582 | 117507.0 |
| efflux transporter | Rifp1Sym_aa00110 | Not Available | Negative | 10560 - 11612 | 38354.4 |
| 3-octaprenyl-4-hydroxybenzoate carboxy-lyase | Rifp1Sym_aa00120 | Not Available | Positive | 11806 - 13272 | 54892.7 |
| para-like protein, atpase involved in chromosome partitioning | Rifp1Sym_aa00130 | Not Available | Positive | 13342 - 13980 | 23709.6 |
| nad-dependent epimerase/dehydratase | Rifp1Sym_aa00140 | Not Available | Negative | 13977 - 14849 | 31879.3 |
| cdp-6-deoxy-l-threo-d-glycero-4-hexulose-3- dehydrase reductase | Rifp1Sym_aa00150 | Not Available | Positive | 14939 - 15949 | 37330.0 |
| hypothetical protein | Rifp1Sym_aa00160 | Not Available | Negative | 15917 - 16099 | 5821.8 |
| hemy family protein | Rifp1Sym_aa00170 | Not Available | Negative | 15997 - 17265 | 47606.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
