Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pili signal transduction protein pili | Rifp1Sym_cb00030 | Not Available | Negative | 2125054 - 2125692 | 23318.1 |
| twitching motility protein pilh | Rifp1Sym_cb00040 | Not Available | Negative | 2125855 - 2126322 | 17371.2 |
| twitching motility protein pilg | Rifp1Sym_cb00050 | Not Available | Negative | 2126390 - 2126794 | 14891.1 |
| hypothetical protein | Rifp1Sym_cb00060 | Not Available | Negative | 2126841 - 2127557 | 26769.6 |
| glutathione synthetase | Rifp1Sym_cb00070 | Not Available | Positive | 2128367 - 2128540 | 6456.94 |
| glutathione synthetase | Rifp1Sym_cb00080 | Not Available | Positive | 2128528 - 2129154 | 22897.3 |
| thiamin biosynthesis lipoprotein apbe | Rifp1Sym_cb00090 | Not Available | Positive | 2129309 - 2130340 | 37853.0 |
| tonb family protein | Rifp1Sym_cb00100 | Not Available | Positive | 2130349 - 2131233 | 32853.4 |
| upf0301 protein yqge | Rifp1Sym_cb00110 | Not Available | Positive | 2131275 - 2131838 | 20217.7 |
| putative holliday junction resolvase | Rifp1Sym_cb00120 | Not Available | Positive | 2131835 - 2132230 | 14755.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
