Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbamoyltransferase hypf | Rifp1Sym_ca00090 | Not Available | Positive | 2106983 - 2109319 | 85457.7 |
| pyruvate-formate lyase-activating enzyme | Rifp1Sym_ca00100 | Not Available | Positive | 2109366 - 2110457 | 40696.1 |
| putative dioxygenase | Rifp1Sym_ca00110 | Not Available | Positive | 2110458 - 2111273 | 29154.7 |
| hypothetical protein | Rifp1Sym_ca00120 | Not Available | Positive | 2111298 - 2111423 | 4872.1 |
| putative signaling protein | Rifp1Sym_ca00130 | Not Available | Positive | 2111648 - 2115214 | 133104.0 |
| pep-cterm system associated sugar transferase | Rifp1Sym_ca00140 | Not Available | Positive | 2115333 - 2116727 | 53139.9 |
| tfp pilus assembly protein fimv | Rifp1Sym_ca00150 | Not Available | Negative | 2116815 - 2118905 | 77721.4 |
| hypothetical protein | Rifp1Sym_ca00160 | Not Available | Positive | 2119487 - 2119582 | 3518.29 |
| putative chemotaxis histidine kinase | Rifp1Sym_cb00010 | Not Available | Negative | 2120363 - 2122858 | 92392.4 |
| twitching motility protein pilj | Rifp1Sym_cb00020 | Not Available | Negative | 2122955 - 2124997 | 72660.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
