Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc abc transporter, inner membrane permease protein znub | Rifp1Sym_by00230 | Not Available | Positive | 2069993 - 2070520 | 18775.6 |
| zinc uptake regulation protein | Rifp1Sym_by00240 | Not Available | Positive | 2070498 - 2070962 | 17235.6 |
| putative lipoprotein | Rifp1Sym_bz00010 | Not Available | Negative | 2071302 - 2071802 | 18351.9 |
| putative pyruvate-flavodoxin oxidoreductase | Rifp1Sym_bz00020 | Not Available | Positive | 2072028 - 2075621 | 130900.0 |
| dihydroorotate oxidase | Rifp1Sym_bz00030 | Not Available | Positive | 2075765 - 2076190 | 15761.5 |
| dihydroorotate oxidase | Rifp1Sym_bz00040 | Not Available | Positive | 2076175 - 2076771 | 21496.9 |
| protein of unknown function duf1342 | Rifp1Sym_bz00050 | Not Available | Positive | 2076884 - 2077693 | 31189.8 |
| hypothetical protein | Rifp1Sym_bz00060 | Not Available | Negative | 2077906 - 2078610 | 26147.8 |
| putative thioredoxin a protein trxa | Rifp1Sym_bz00070 | Not Available | Positive | 2078811 - 2079185 | 13694.8 |
| hydroxyacylglutathione hydrolase | Rifp1Sym_bz00080 | Not Available | Positive | 2079185 - 2079817 | 23585.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
