Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-length control protein flik | Rifp1Sym_by00040 | Not Available | Positive | 2048575 - 2050947 | 79990.7 |
| Trna-glu | Not Available | Not Available | Positive | 2051422 - 2051497 | Not Available |
| diguanylate cyclase/phosphodiesterase with pas/pac sensor | Rifp1Sym_by00050 | Not Available | Negative | 2051630 - 2052283 | 23761.7 |
| diguanylate cyclase/phosphodiesterase with pas/pac sensor | Rifp1Sym_by00060 | Not Available | Negative | 2052250 - 2054253 | 75796.8 |
| hypothetical protein | Rifp1Sym_by00070 | Not Available | Negative | 2054566 - 2055249 | 25108.1 |
| rna polymerase sigma factor sigk | Rifp1Sym_by00080 | Not Available | Negative | 2055246 - 2055830 | 22576.2 |
| beta-lactamase class c | Rifp1Sym_by00090 | Not Available | Negative | 2056057 - 2057877 | 66588.0 |
| hypothetical protein | Rifp1Sym_by00100 | Not Available | Negative | 2057877 - 2058185 | 11168.0 |
| glu/leu/phe/val-type dehydrogenase | Rifp1Sym_by00110 | Not Available | Positive | 2058347 - 2059768 | 52386.6 |
| atp-dependent helicase yoaa, ding family | Rifp1Sym_by00120 | Not Available | Negative | 2060016 - 2061926 | 70689.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
