Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_bx00220 | Not Available | Positive | 2036222 - 2036956 | 27235.0 |
| dna topoisomerase 4 subunit a | Rifp1Sym_bx00230 | Not Available | Positive | 2037028 - 2039301 | 84152.2 |
| Trna-leu | Not Available | Not Available | Positive | 2039383 - 2039467 | Not Available |
| cell division trigger factor | Rifp1Sym_bx00240 | Not Available | Positive | 2039559 - 2040848 | 48088.0 |
| atp-dependent clp protease proteolytic subunit | Rifp1Sym_bx00250 | Not Available | Positive | 2040979 - 2041620 | 23106.9 |
| atp-dependent clp protease, atp-binding subunit clpx | Rifp1Sym_bx00260 | Not Available | Positive | 2041769 - 2043046 | 46571.7 |
| atp-dependent protease la type i | Rifp1Sym_bx00270 | Not Available | Positive | 2043218 - 2045704 | 92714.4 |
| putative acriflavine resistance protein | Rifp1Sym_by00010 | Not Available | Positive | 2046005 - 2046286 | 9863.12 |
| hypothetical protein | Rifp1Sym_by00020 | Not Available | Positive | 2046292 - 2047044 | 27867.4 |
| guanine deaminase | Rifp1Sym_by00030 | Not Available | Negative | 2047105 - 2048430 | 49066.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
