Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_ac00230 | Not Available | Negative | 191803 - 194427 | 95775.4 |
| hypothetical protein | Rifp1Sym_ac00240 | Not Available | Negative | 194424 - 195059 | 23348.8 |
| hypothetical protein | Rifp1Sym_ac00250 | Not Available | Negative | 195069 - 195950 | 32908.5 |
| hypothetical protein | Rifp1Sym_ac00260 | Not Available | Negative | 196055 - 196600 | 19220.5 |
| two component sigma-54 specific, transcriptional regulator, fis family protein | Rifp1Sym_ac00270 | Not Available | Negative | 197517 - 198935 | 52466.8 |
| trypsin-like serine protease degq | Rifp1Sym_ac00280 | Not Available | Positive | 199666 - 200895 | 45824.5 |
| cation/multidrug efflux pump, acrb-like or heavy metall-specific | Rifp1Sym_ac00290 | Not Available | Negative | 200997 - 204107 | 114608.0 |
| putative rnd efflux membrane fusion protein | Rifp1Sym_ac00300 | Not Available | Negative | 204104 - 205351 | 45999.9 |
| lps-assembly protein lptd | Rifp1Sym_ac00310 | Not Available | Positive | 205433 - 207718 | 86435.6 |
| chaperone sura | Rifp1Sym_ac00320 | Not Available | Positive | 207725 - 209023 | 48410.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
