Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar basal-body rod protein flgb | Rifp1Sym_bw00260 | Not Available | Negative | 2013100 - 2013516 | 15523.2 |
| flagellar basal-body p-ring formation protein flga | Rifp1Sym_bw00270 | Not Available | Positive | 2013809 - 2014540 | 26399.3 |
| negative regulator of flagellin synthesis flgm | Rifp1Sym_bw00280 | Not Available | Positive | 2014677 - 2014982 | 10711.4 |
| hypothetical protein | Rifp1Sym_bw00290 | Not Available | Positive | 2014997 - 2015485 | 18071.3 |
| hypothetical protein | Rifp1Sym_bw00300 | Not Available | Negative | 2015490 - 2016134 | 23575.5 |
| radical sam domain-containing protein | Rifp1Sym_bw00310 | Not Available | Negative | 2016177 - 2017139 | 35471.3 |
| hypothetical protein | Rifp1Sym_bw00320 | Not Available | Negative | 2017315 - 2018166 | 32592.2 |
| phosphohistidine phosphatase sixa | Rifp1Sym_bw00330 | Not Available | Negative | 2018344 - 2018856 | 18918.9 |
| putative peptidase, membrane zinc metallopeptidase | Rifp1Sym_bw00340 | Not Available | Negative | 2018917 - 2019600 | 25357.3 |
| hypothetical protein | Rifp1Sym_bx00010 | Not Available | Positive | 2020016 - 2020555 | 20426.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
