Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| penicillin-binding protein | Rifp1Sym_bv00120 | Not Available | Negative | 1977305 - 1978720 | 51740.3 |
| penicillin-binding protein 2 | Rifp1Sym_bv00130 | Not Available | Negative | 1978725 - 1979144 | 16264.0 |
| rod shape-determining protein mred | Rifp1Sym_bv00140 | Not Available | Negative | 1979318 - 1979806 | 18446.3 |
| rod shape-determining protein mrec | Rifp1Sym_bv00150 | Not Available | Negative | 1979803 - 1980696 | 32535.4 |
| rod shape-determining protein mreb | Rifp1Sym_bv00160 | Not Available | Negative | 1980732 - 1981781 | 37194.9 |
| hypothetical protein | Rifp1Sym_bv00170 | Not Available | Negative | 1982322 - 1983146 | 30709.5 |
| aspartyl/glutamyl-trna(asn/gln) amidotransferase subunit c | Rifp1Sym_bv00180 | Not Available | Positive | 1983506 - 1983793 | 10624.6 |
| glutamyl-trna(gln) amidotransferase subunit a | Rifp1Sym_bv00190 | Not Available | Positive | 1983835 - 1985286 | 50918.4 |
| hypothetical protein | Rifp1Sym_bv00210 | Not Available | Positive | 1987338 - 1989068 | 60025.2 |
| hypothetical protein | Rifp1Sym_bv00220 | Not Available | Positive | 1989445 - 1990314 | 31544.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
