Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase, group 1 | Rifp1Sym_bu00070 | Not Available | Negative | 1946421 - 1947569 | 42157.9 |
| gdp-6-deoxy-d-lyxo-4-hexulose reductase | Rifp1Sym_bu00080 | Not Available | Negative | 1947547 - 1948464 | 33207.5 |
| mannose-1-phosphate guanyltransferase | Rifp1Sym_bu00090 | Not Available | Negative | 1948461 - 1949201 | 27234.0 |
| ribosomal rna large subunit methyltransferase a | Rifp1Sym_bu00100 | Not Available | Positive | 1949375 - 1950331 | 35577.1 |
| 4-hydroxybenzoate octaprenyltransferase | Rifp1Sym_bu00110 | Not Available | Negative | 1950395 - 1951222 | 30429.1 |
| putative chorismate-pyruvate lyase | Rifp1Sym_bu00120 | Not Available | Negative | 1951304 - 1951879 | 21733.5 |
| hypothetical protein | Rifp1Sym_bu00130 | Not Available | Positive | 1952059 - 1953471 | 52766.6 |
| hypothetical protein | Rifp1Sym_bu00140 | Not Available | Positive | 1954045 - 1957062 | 111455.0 |
| hypothetical protein | Rifp1Sym_bu00150 | Not Available | Positive | 1957023 - 1957520 | 18084.8 |
| hypothetical protein | Rifp1Sym_bu00160 | Not Available | Positive | 1957530 - 1957853 | 10948.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
