Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_bs00210 | Not Available | Positive | 1905635 - 1908091 | 88398.7 |
| ppic-type peptidyl-prolyl cis-trans isomerase | Rifp1Sym_bs00220 | Not Available | Positive | 1908320 - 1909615 | 48583.3 |
| putative ahpc/tsa family protein | Rifp1Sym_bs00230 | Not Available | Positive | 1909612 - 1910148 | 20314.7 |
| metal dependent phosphohydrolase | Rifp1Sym_bs00240 | Not Available | Negative | 1910157 - 1911071 | 33112.8 |
| putative homoserine kinase type ii | Rifp1Sym_bs00250 | Not Available | Positive | 1911454 - 1911930 | 17926.2 |
| protein rdoa | Rifp1Sym_bs00260 | Not Available | Positive | 1911888 - 1912490 | 23044.5 |
| atp citrate lyase, alpha subunit | Rifp1Sym_bt00010 | Not Available | Positive | 1913539 - 1914183 | 23230.2 |
| atp citrate lyase, beta subunit | Rifp1Sym_bt00020 | Not Available | Positive | 1914263 - 1916980 | 96796.8 |
| nadp dependent isocitrate dehydrogenase | Rifp1Sym_bt00030 | Not Available | Positive | 1917023 - 1919254 | 80930.9 |
| aconitate hydratase/aconitase a | Rifp1Sym_bt00040 | Not Available | Positive | 1919832 - 1921751 | 67948.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
