Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_bs00010 | Not Available | Positive | 1886191 - 1886337 | 5113.95 |
| protein of unknown function duf81 | Rifp1Sym_bs00020 | Not Available | Positive | 1886409 - 1887224 | 28363.6 |
| hypothetical protein | Rifp1Sym_bs00030 | Not Available | Negative | 1887183 - 1887950 | 28368.7 |
| stationary phase protein, binds sigma 70 rna polymerase subunit | Rifp1Sym_bs00040 | Not Available | Positive | 1888156 - 1888665 | 19162.6 |
| hypothetical protein | Rifp1Sym_bs00050 | Not Available | Positive | 1888854 - 1891253 | 91512.5 |
| soluble lytic murein transglycosylase | Rifp1Sym_bs00060 | Not Available | Negative | 1891262 - 1893247 | 76949.8 |
| hypothetical protein | Rifp1Sym_bs00070 | Not Available | Negative | 1893332 - 1893442 | 4080.91 |
| hypothetical protein | Rifp1Sym_bs00080 | Not Available | Positive | 1893489 - 1893947 | 16907.6 |
| sel1 domain protein repeat-containing protein | Rifp1Sym_bs00090 | Not Available | Positive | 1893901 - 1894440 | 19916.8 |
| gtpase-translation elongation factor | Rifp1Sym_bs00100 | Not Available | Negative | 1894443 - 1896287 | 68956.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
