Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_bq00300 | Not Available | Negative | 1856426 - 1857745 | 48864.3 |
| stringent starvation protein a | Rifp1Sym_br00020 | Not Available | Negative | 1858387 - 1859010 | 23850.0 |
| cytochrome c1 | Rifp1Sym_br00030 | Not Available | Negative | 1859142 - 1859882 | 27874.4 |
| cytochrome b | Rifp1Sym_br00040 | Not Available | Negative | 1859879 - 1861120 | 46864.1 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | Rifp1Sym_br00050 | Not Available | Negative | 1861120 - 1861716 | 21098.2 |
| dinuclear metal center protein, ybgi/sa1388 family | Rifp1Sym_br00060 | Not Available | Negative | 1862029 - 1862787 | 27606.9 |
| protease degq | Rifp1Sym_br00070 | Not Available | Positive | 1862829 - 1864010 | 41265.6 |
| adenylate cyclase 1 | Rifp1Sym_br00080 | Not Available | Positive | 1864073 - 1865146 | 40313.5 |
| hypothetical protein | Rifp1Sym_br00090 | Not Available | Negative | 1865133 - 1866287 | 42030.4 |
| heparinase ii/iii family protein | Rifp1Sym_br00100 | Not Available | Negative | 1866223 - 1868196 | 73403.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
