Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative abc transporter, permease component | Rifp1Sym_bq00200 | Not Available | Negative | 1846321 - 1847121 | 28447.7 |
| glutamate synthase | Rifp1Sym_bq00210 | Not Available | Negative | 1847548 - 1849149 | 57444.7 |
| ribosomal protein l11 methyltransferase | Rifp1Sym_bq00220 | Not Available | Negative | 1849176 - 1850054 | 31890.2 |
| biotin carboxylase | Rifp1Sym_bq00230 | Not Available | Negative | 1850141 - 1851481 | 48416.3 |
| biotin carboxyl carrier protein of acetyl-coa carboxylase | Rifp1Sym_bq00240 | Not Available | Negative | 1851490 - 1851945 | 15933.1 |
| 3-dehydroquinate dehydratase | Rifp1Sym_bq00250 | Not Available | Negative | 1851961 - 1852410 | 16258.4 |
| redoxin domain protein | Rifp1Sym_bq00260 | Not Available | Negative | 1852672 - 1853013 | 12827.9 |
| thiol:disulfide interchange protein dsbd | Rifp1Sym_bq00270 | Not Available | Negative | 1853220 - 1855532 | 81907.0 |
| divalent-cation tolerance protein cuta | Rifp1Sym_bq00280 | Not Available | Negative | 1855514 - 1855840 | 12040.5 |
| cytoplasmic membrane protein | Rifp1Sym_bq00290 | Not Available | Positive | 1855898 - 1856401 | 18307.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
