Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp compounds hydrolase nude | Rifp1Sym_ac00030 | Not Available | Positive | 170085 - 170672 | 21933.2 |
| 3'(2'),5'-bisphosphate nucleotidase | Rifp1Sym_ac00040 | Not Available | Positive | 170669 - 170926 | 9169.86 |
| 3'(2'),5'-bisphosphate nucleotidase cysq | Rifp1Sym_ac00050 | Not Available | Positive | 170995 - 171477 | 17505.8 |
| thioredoxin soxw | Rifp1Sym_ac00060 | Not Available | Positive | 171582 - 172658 | 41729.3 |
| hypothetical protein | Rifp1Sym_ac00070 | Not Available | Negative | 172655 - 173089 | 16412.6 |
| diguanylate cyclase | Rifp1Sym_ac00080 | Not Available | Positive | 173208 - 174317 | 42375.8 |
| asma family protein | Rifp1Sym_ac00090 | Not Available | Negative | 174314 - 177652 | 121545.0 |
| hypothetical protein | Rifp1Sym_ac00100 | Not Available | Positive | 177776 - 178690 | 33779.1 |
| hypothetical protein | Rifp1Sym_ac00110 | Not Available | Positive | 178777 - 179922 | 42163.4 |
| putative trna-dihydrouridine synthase | Rifp1Sym_ac00120 | Not Available | Positive | 180027 - 181076 | 38355.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
