Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative transcriptional regulator containing hth domain | Rifp1Sym_bo00280 | Not Available | Positive | 1799451 - 1800278 | 32161.3 |
| cytochrome c5530 family protein | Rifp1Sym_bp00010 | Not Available | Positive | 1800319 - 1801089 | 27566.4 |
| cytochrome c5530 family protein | Rifp1Sym_bp00020 | Not Available | Positive | 1801034 - 1802287 | 44936.9 |
| asparagine synthetase | Rifp1Sym_bp00030 | Not Available | Negative | 1802325 - 1803368 | 38863.4 |
| asparagine synthetase | Rifp1Sym_bp00040 | Not Available | Negative | 1803371 - 1804471 | 41279.2 |
| 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit | Rifp1Sym_bp00050 | Not Available | Positive | 1804547 - 1806310 | 62164.7 |
| 2-oxoglutarate ferredoxin oxidoreductase, beta subunit | Rifp1Sym_bp00060 | Not Available | Positive | 1806285 - 1807136 | 30560.7 |
| rubrerythrin | Rifp1Sym_bp00070 | Not Available | Positive | 1807133 - 1807660 | 20185.5 |
| peptide chain release factor 2 | Rifp1Sym_bp00080 | Not Available | Negative | 1807668 - 1808081 | 15800.4 |
| hypothetical protein | Rifp1Sym_bp00090 | Not Available | Positive | 1808066 - 1808233 | 6282.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
