Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate and nitrate reduction regulatory protein | Rifp1Sym_bo00180 | Not Available | Positive | 1788127 - 1788927 | 29998.9 |
| dna polymerase iii subunit epsilon | Rifp1Sym_bo00190 | Not Available | Negative | 1788942 - 1789658 | 26254.5 |
| ribonuclease h | Rifp1Sym_bo00200 | Not Available | Negative | 1789655 - 1790128 | 17781.1 |
| putative sam-dependent methyltransferase | Rifp1Sym_bo00210 | Not Available | Negative | 1790091 - 1790828 | 27793.8 |
| membrane-bound lytic murein transglycosylase d | Rifp1Sym_bo00220 | Not Available | Positive | 1790980 - 1792740 | 65603.7 |
| hypothetical protein | Rifp1Sym_bo00230 | Not Available | Positive | 1792876 - 1793064 | 6875.01 |
| mscs mechanosensitive ion channel | Rifp1Sym_bo00240 | Not Available | Positive | 1793134 - 1794240 | 40542.9 |
| putative fibronectin type iii domain protein | Rifp1Sym_bo00250 | Not Available | Positive | 1794624 - 1798187 | 125933.0 |
| hypothetical protein | Rifp1Sym_bo00260 | Not Available | Negative | 1798283 - 1799080 | 29206.2 |
| hypothetical protein | Rifp1Sym_bo00270 | Not Available | Negative | 1799073 - 1799411 | 11058.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
