Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| (dimethylallyl)adenosine trna methylthiotransferase miab | Rifp1Sym_bn00290 | Not Available | Negative | 1767597 - 1768949 | 50368.3 |
| cdp-6-deoxy-l-threo-d-glycero-4-hexulose-3- dehydrase reductase | Rifp1Sym_bn00300 | Not Available | Negative | 1769049 - 1770032 | 36861.2 |
| guanylate kinase | Rifp1Sym_bn00310 | Not Available | Negative | 1770260 - 1770586 | 12409.6 |
| cytochrome c oxidase subunit ccop | Rifp1Sym_bo00010 | Not Available | Negative | 1770829 - 1771782 | 34519.0 |
| cytochrome c oxidase subunit ccoo | Rifp1Sym_bo00020 | Not Available | Negative | 1771875 - 1772588 | 26841.1 |
| cytochrome c oxidase subunit ccon | Rifp1Sym_bo00030 | Not Available | Negative | 1772608 - 1774035 | 53343.5 |
| rna polymerase sigma factor rpos | Rifp1Sym_bo00040 | Not Available | Negative | 1774481 - 1775491 | 38515.1 |
| putative membrane protein | Rifp1Sym_bo00050 | Not Available | Negative | 1776688 - 1777263 | 21739.1 |
| protein-l-isoaspartate o-methyltransferase | Rifp1Sym_bo00060 | Not Available | Negative | 1777260 - 1777928 | 24254.6 |
| 5'-nucleotidase sure | Rifp1Sym_bo00070 | Not Available | Negative | 1777925 - 1778677 | 26557.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
