Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | Rifp1Sym_bn00190 | Not Available | Positive | 1759808 - 1760179 | 13902.6 |
| aromatic acid decarboxylase | Rifp1Sym_bn00200 | Not Available | Negative | 1760187 - 1760816 | 22679.9 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | Rifp1Sym_bn00210 | Not Available | Negative | 1761063 - 1762424 | 49331.1 |
| hypothetical protein | Rifp1Sym_bn00220 | Not Available | Negative | 1762424 - 1762927 | 17892.8 |
| hypothetical protein | Rifp1Sym_bn00230 | Not Available | Negative | 1762964 - 1763461 | 18063.4 |
| apolipoprotein n-acyltransferase | Rifp1Sym_bn00240 | Not Available | Negative | 1763475 - 1764662 | 43580.7 |
| apolipoprotein n-acyltransferase | Rifp1Sym_bn00250 | Not Available | Negative | 1764656 - 1765237 | 21053.4 |
| magnesium and cobalt efflux protein corc | Rifp1Sym_bn00260 | Not Available | Negative | 1765212 - 1766078 | 32979.4 |
| putative metalloprotease | Rifp1Sym_bn00270 | Not Available | Negative | 1766075 - 1766611 | 19208.9 |
| phosphate starvation-inducible protein phoh-like protein | Rifp1Sym_bn00280 | Not Available | Negative | 1766568 - 1767563 | 37172.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
