Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleoside permease nupx | Rifp1Sym_bm00250 | Not Available | Negative | 1738145 - 1739389 | 43855.4 |
| hypothetical protein | Rifp1Sym_bm00260 | Not Available | Negative | 1739393 - 1739881 | 18156.6 |
| 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase | Rifp1Sym_bm00270 | Not Available | Negative | 1739889 - 1740404 | 18763.9 |
| putative metallopeptidase m23 | Rifp1Sym_bn00020 | Not Available | Positive | 1742153 - 1743718 | 57990.5 |
| anhydro-n-acetylmuramic acid kinase | Rifp1Sym_bn00030 | Not Available | Positive | 1743708 - 1744820 | 39735.4 |
| iron-sulfur cluster insertion protein erpa | Rifp1Sym_bn00040 | Not Available | Negative | 1744884 - 1745237 | 12280.3 |
| cell shape determination protein ccma | Rifp1Sym_bn00050 | Not Available | Negative | 1745346 - 1745783 | 15356.2 |
| hypothetical protein | Rifp1Sym_bn00060 | Not Available | Negative | 1745813 - 1746535 | 26553.3 |
| n-acetyl-gamma-glutamyl-phosphate reductase | Rifp1Sym_bn00070 | Not Available | Negative | 1746542 - 1747738 | 42790.4 |
| hypothetical protein | Rifp1Sym_bn00080 | Not Available | Positive | 1747743 - 1748429 | 24385.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
