Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative thiol-disulfide oxidoreductase | Rifp1Sym_bm00150 | Not Available | Positive | 1726166 - 1726792 | 23660.8 |
| putative soxw type thioredoxin | Rifp1Sym_bm00160 | Not Available | Positive | 1726802 - 1727341 | 20983.1 |
| outer membrane efflux protein | Rifp1Sym_bm00170 | Not Available | Positive | 1727338 - 1728654 | 49446.7 |
| secretion protein, hlyd family | Rifp1Sym_bm00180 | Not Available | Positive | 1728651 - 1729427 | 28464.9 |
| acylphosphate phosphohydrolase | Rifp1Sym_bm00190 | Not Available | Positive | 1729417 - 1729713 | 10671.8 |
| sugar fermentation stimulation-like protein | Rifp1Sym_bm00200 | Not Available | Positive | 1730725 - 1731438 | 26326.8 |
| 3',5'-cyclic-nucleotide phosphodiesterase | Rifp1Sym_bm00210 | Not Available | Negative | 1731435 - 1732472 | 38350.0 |
| sensor protein gacs | Rifp1Sym_bm00220 | Not Available | Positive | 1732816 - 1735491 | 98419.3 |
| putative short chain dehydrogenase | Rifp1Sym_bm00230 | Not Available | Negative | 1735631 - 1737598 | 71027.0 |
| hypothetical protein | Rifp1Sym_bm00240 | Not Available | Negative | 1737651 - 1738115 | 16667.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
