Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin domain-containing protein | Rifp1Sym_bl00070 | Not Available | Negative | 1684202 - 1685155 | 36044.1 |
| thioredoxin-2 | Rifp1Sym_bl00080 | Not Available | Positive | 1685191 - 1685634 | 16093.5 |
| carbamoyl-phosphate synthase small chain | Rifp1Sym_bl00090 | Not Available | Positive | 1685730 - 1686386 | 24385.3 |
| carbamoyl-phosphate synthase small chain | Rifp1Sym_bl00100 | Not Available | Positive | 1686242 - 1686922 | 24604.3 |
| carbamoyl-phosphate synthase large chain | Rifp1Sym_bl00110 | Not Available | Positive | 1687041 - 1690250 | 117255.0 |
| transcription elongation factor grea | Rifp1Sym_bl00120 | Not Available | Positive | 1690277 - 1690753 | 17315.4 |
| rna binding protein | Rifp1Sym_bl00130 | Not Available | Negative | 1690805 - 1691101 | 10856.4 |
| ribosomal rna large subunit methyltransferase e | Rifp1Sym_bl00140 | Not Available | Positive | 1691204 - 1691824 | 23157.3 |
| atp-dependent zinc metalloprotease ftsh | Rifp1Sym_bl00150 | Not Available | Positive | 1691908 - 1693833 | 69907.7 |
| dihydropteroate synthase | Rifp1Sym_bl00160 | Not Available | Positive | 1693852 - 1694676 | 28285.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
