Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine synthase | Rifp1Sym_bk00250 | Not Available | Negative | 1672969 - 1674738 | 65987.9 |
| methionine synthase | Rifp1Sym_bk00260 | Not Available | Negative | 1674678 - 1676687 | 73027.7 |
| response regulator receiver | Rifp1Sym_bk00270 | Not Available | Positive | 1676842 - 1677936 | 39700.9 |
| peptide methionine sulfoxide reductase msra | Rifp1Sym_bk00280 | Not Available | Positive | 1678561 - 1679199 | 23569.9 |
| hypothetical protein | Rifp1Sym_bl00010 | Not Available | Positive | 1679395 - 1679487 | 2905.51 |
| acetyl-coenzyme a carboxylase carboxyl transferase subunit alpha | Rifp1Sym_bl00020 | Not Available | Positive | 1679577 - 1680536 | 35546.8 |
| trna(ile)-lysidine synthase | Rifp1Sym_bl00030 | Not Available | Positive | 1680568 - 1681941 | 50984.7 |
| hypothetical protein | Rifp1Sym_bl00040 | Not Available | Negative | 1682131 - 1682580 | 17555.3 |
| hypothetical protein | Rifp1Sym_bl00050 | Not Available | Negative | 1682776 - 1683081 | 11000.8 |
| hypothetical protein | Rifp1Sym_bl00060 | Not Available | Negative | 1683340 - 1684191 | 32483.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
