Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase | Rifp1Sym_bj00180 | Not Available | Negative | 1633634 - 1634095 | 16925.7 |
| putative yjef protein | Rifp1Sym_bj00190 | Not Available | Negative | 1634082 - 1635572 | 51812.0 |
| putative electron transport protein | Rifp1Sym_bj00200 | Not Available | Positive | 1635835 - 1636764 | 35011.6 |
| hypothetical protein | Rifp1Sym_bj00210 | Not Available | Negative | 1636733 - 1637824 | 40892.9 |
| oligoribonuclease | Rifp1Sym_bj00220 | Not Available | Negative | 1638023 - 1638571 | 20589.5 |
| peptidase, m48 family | Rifp1Sym_bj00230 | Not Available | Positive | 1638631 - 1639941 | 48908.4 |
| hypothetical protein | Rifp1Sym_bj00240 | Not Available | Positive | 1639954 - 1640151 | 6995.37 |
| putative ribosome biogenesis gtpase | Rifp1Sym_bj00250 | Not Available | Positive | 1640235 - 1641236 | 36915.3 |
| virulence sensor histidine kinase phoq | Rifp1Sym_bj00260 | Not Available | Negative | 1641295 - 1642653 | 49479.3 |
| virulence transcriptional regulatory protein phop | Rifp1Sym_bj00270 | Not Available | Negative | 1642660 - 1643355 | 26432.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
