Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensory box/ggdef family protein | Rifp1Sym_bi00160 | Not Available | Negative | 1599863 - 1600183 | 11771.4 |
| putative diguanylate cyclase ydam | Rifp1Sym_bi00170 | Not Available | Negative | 1600209 - 1601144 | 34699.3 |
| hypothetical protein | Rifp1Sym_bi00180 | Not Available | Positive | 1601233 - 1601571 | 12297.0 |
| hypothetical protein | Rifp1Sym_bi00190 | Not Available | Positive | 1601716 - 1601844 | 4353.3 |
| hypothetical protein | Rifp1Sym_bi00200 | Not Available | Positive | 1601994 - 1602851 | 31614.3 |
| periplasmic sensor hybrid histidine kinase | Rifp1Sym_bi00210 | Not Available | Positive | 1602775 - 1603656 | 32730.8 |
| sensor protein gacs | Rifp1Sym_bi00220 | Not Available | Positive | 1603590 - 1604780 | 43311.4 |
| response regulator receiver | Rifp1Sym_bi00230 | Not Available | Positive | 1604806 - 1605633 | 30385.0 |
| response regulator pled | Rifp1Sym_bi00240 | Not Available | Positive | 1605614 - 1606543 | 33987.1 |
| pyruvate dehydrogenase e1 component | Rifp1Sym_bi00250 | Not Available | Positive | 1606873 - 1609527 | 99634.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
