Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chorismate synthase | Rifp1Sym_bh00170 | Not Available | Positive | 1577189 - 1578289 | 39492.9 |
| putative 3-phenylpropionic acid transporter | Rifp1Sym_bh00180 | Not Available | Positive | 1578359 - 1579495 | 42176.2 |
| hemolysin iii-like protein | Rifp1Sym_bh00190 | Not Available | Negative | 1579506 - 1580165 | 23934.0 |
| hth-type transcriptional regulator | Rifp1Sym_bh00200 | Not Available | Negative | 1580348 - 1581265 | 33652.6 |
| 3-isopropylmalate dehydratase large subunit | Rifp1Sym_bh00210 | Not Available | Positive | 1581364 - 1582767 | 50167.4 |
| hypothetical protein | Rifp1Sym_bi00010 | Not Available | Positive | 1583633 - 1586266 | 88632.5 |
| hypothetical protein | Rifp1Sym_bi00020 | Not Available | Positive | 1586257 - 1587054 | 27388.4 |
| prolyl-trna synthetase | Rifp1Sym_bi00030 | Not Available | Negative | 1587215 - 1588459 | 45197.8 |
| prolyl-trna synthetase | Rifp1Sym_bi00040 | Not Available | Negative | 1588110 - 1588934 | 31780.5 |
| cytochrome c, class i | Rifp1Sym_bi00050 | Not Available | Negative | 1589036 - 1589887 | 32168.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
