Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_bf00350 | Not Available | Positive | 1513412 - 1513576 | 6125.49 |
| putative poly(beta-d-mannuronate) o-acetylase | Rifp1Sym_bf00360 | Not Available | Positive | 1513784 - 1515334 | 59319.9 |
| oligopeptide/dipeptide abc transporter, atpase subunit | Rifp1Sym_bg00010 | Not Available | Negative | 1516009 - 1517883 | 68492.3 |
| hypothetical protein | Rifp1Sym_bg00020 | Not Available | Negative | 1517880 - 1518029 | 5662.89 |
| oligopeptide transport system permease protein appc | Rifp1Sym_bg00030 | Not Available | Negative | 1518042 - 1519469 | 52695.4 |
| putative peptide transport system permease | Rifp1Sym_bg00040 | Not Available | Negative | 1519488 - 1520465 | 36012.1 |
| oligopeptide abc transporter periplasmic component | Rifp1Sym_bg00050 | Not Available | Negative | 1520462 - 1522648 | 81465.5 |
| nadh dependent enoyl-[acyl-carrier-protein] reductase | Rifp1Sym_bg00060 | Not Available | Positive | 1522795 - 1523598 | 28691.5 |
| hypothetical protein | Rifp1Sym_bg00070 | Not Available | Negative | 1523683 - 1523949 | 9697.53 |
| putative nagd-like phosphatase | Rifp1Sym_bg00080 | Not Available | Positive | 1524949 - 1525599 | 22770.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
