Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| major facilitator superfamily protein | Rifp1Sym_bf00250 | Not Available | Positive | 1502498 - 1503760 | 45348.5 |
| permease | Rifp1Sym_bf00260 | Not Available | Positive | 1503747 - 1504706 | 34514.2 |
| sigma-54 dependent dna-binding response regulator mrpb | Rifp1Sym_bf00270 | Not Available | Negative | 1504814 - 1505821 | 36668.0 |
| multi-sensor signal transduction histidine kinase | Rifp1Sym_bf00280 | Not Available | Positive | 1506168 - 1507661 | 55001.4 |
| diheme cytochrome c | Rifp1Sym_bf00290 | Not Available | Negative | 1508024 - 1508548 | 19128.6 |
| cytochrome c-type protein shp | Rifp1Sym_bf00300 | Not Available | Negative | 1508575 - 1508976 | 15031.1 |
| cytochrome b561 | Rifp1Sym_bf00310 | Not Available | Negative | 1509001 - 1509891 | 33350.4 |
| hypothetical protein | Rifp1Sym_bf00320 | Not Available | Positive | 1510090 - 1510326 | 8946.16 |
| sensor protein zras | Rifp1Sym_bf00330 | Not Available | Positive | 1510596 - 1511756 | 42888.6 |
| transcriptional regulatory protein zrar | Rifp1Sym_bf00340 | Not Available | Positive | 1511753 - 1513120 | 51177.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
