Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative type i restriction-modification system endonuclease | Rifp1Sym_be00010 | Not Available | Positive | 1446828 - 1447472 | 24213.6 |
| Trna-met | Not Available | Not Available | Positive | 1447516 - 1447592 | Not Available |
| rna polymerase sigma factor rpod | Rifp1Sym_be00020 | Not Available | Negative | 1447690 - 1449552 | 70437.3 |
| dna primase | Rifp1Sym_be00030 | Not Available | Negative | 1449620 - 1451386 | 66464.5 |
| hypothetical protein | Rifp1Sym_be00040 | Not Available | Negative | 1451462 - 1451905 | 16461.0 |
| 30s ribosomal protein s21 | Rifp1Sym_be00050 | Not Available | Negative | 1451935 - 1452150 | 8786.66 |
| putative o-sialoglycoprotein endopeptidase | Rifp1Sym_be00060 | Not Available | Positive | 1452287 - 1453342 | 37857.8 |
| glycerol-3-phosphate acyltransferase | Rifp1Sym_be00070 | Not Available | Negative | 1453339 - 1453995 | 23447.5 |
| dihydroneopterin aldolase | Rifp1Sym_be00080 | Not Available | Positive | 1454195 - 1454551 | 12993.5 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | Rifp1Sym_be00090 | Not Available | Positive | 1454544 - 1455038 | 18754.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
