Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsq | Rifp1Sym_bc00130 | Not Available | Negative | 1391801 - 1392616 | 31057.9 |
| d-alanine--d-alanine ligase | Rifp1Sym_bc00140 | Not Available | Negative | 1392613 - 1393545 | 33313.7 |
| udp-n-acetylenolpyruvoylglucosamine reductase | Rifp1Sym_bc00150 | Not Available | Negative | 1393542 - 1394441 | 32823.5 |
| udp-n-acetylmuramate--l-alanine ligase | Rifp1Sym_bc00160 | Not Available | Negative | 1394638 - 1396077 | 51814.1 |
| udp-n-acetylglucosamine--n-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol n-acetylglucosamine transferase | Rifp1Sym_bc00170 | Not Available | Negative | 1396070 - 1397152 | 38343.8 |
| cell division protein ftsw | Rifp1Sym_bc00180 | Not Available | Negative | 1397137 - 1398336 | 43606.3 |
| udp-n-acetylmuramoylalanine--d-glutamate ligase | Rifp1Sym_bc00190 | Not Available | Negative | 1398333 - 1399589 | 44263.3 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | Rifp1Sym_bc00200 | Not Available | Negative | 1399687 - 1400769 | 39376.4 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | Rifp1Sym_bc00210 | Not Available | Negative | 1400772 - 1402136 | 48141.4 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | Rifp1Sym_bc00220 | Not Available | Negative | 1402133 - 1403311 | 42271.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
