Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_bc00030 | Not Available | Positive | 1379079 - 1379462 | 14560.0 |
| putative sulfur deprivation response regulator | Rifp1Sym_bc00040 | Not Available | Positive | 1379519 - 1380904 | 49254.5 |
| putative sulfur deprivation response regulator | Rifp1Sym_bc00050 | Not Available | Positive | 1380898 - 1381515 | 21720.3 |
| thiamine monophosphate synthase | Rifp1Sym_bc00060 | Not Available | Negative | 1381547 - 1382482 | 34454.6 |
| arginine biosynthesis bifunctional protein argj | Rifp1Sym_bc00070 | Not Available | Negative | 1382537 - 1383742 | 42629.7 |
| protein translocase subunit seca | Rifp1Sym_bc00080 | Not Available | Negative | 1383739 - 1386552 | 105719.0 |
| membrane protein | Rifp1Sym_bc00090 | Not Available | Negative | 1386668 - 1387633 | 35121.6 |
| udp-3-o-[3-hydroxymyristoyl] n-acetylglucosamine deacetylase | Rifp1Sym_bc00100 | Not Available | Negative | 1388208 - 1389119 | 33825.4 |
| cell division protein ftsz | Rifp1Sym_bc00110 | Not Available | Negative | 1389324 - 1390517 | 41495.6 |
| cell division protein ftsa | Rifp1Sym_bc00120 | Not Available | Negative | 1390565 - 1391800 | 44276.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
