Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | Rifp1Sym_bb00190 | Not Available | Negative | 1361946 - 1362254 | 10644.4 |
| histidine triad (hit) protein | Rifp1Sym_bb00200 | Not Available | Negative | 1362263 - 1362439 | 6464.81 |
| histidine triad (hit) protein | Rifp1Sym_bb00210 | Not Available | Negative | 1362348 - 1362614 | 9563.49 |
| recombination protein recr | Rifp1Sym_bb00220 | Not Available | Negative | 1362701 - 1363327 | 23151.1 |
| dna-binding protein, ybab/ebfc family | Rifp1Sym_bb00230 | Not Available | Negative | 1363332 - 1363655 | 11620.1 |
| dna polymerase iii subunit tau | Rifp1Sym_bb00240 | Not Available | Negative | 1363913 - 1365421 | 54144.2 |
| hypothetical protein | Rifp1Sym_bb00250 | Not Available | Negative | 1365833 - 1366612 | 29289.9 |
| serine hydroxymethyltransferase 1 | Rifp1Sym_bb00260 | Not Available | Positive | 1366839 - 1368095 | 45622.2 |
| transcriptional repressor nrdr | Rifp1Sym_bb00270 | Not Available | Positive | 1368208 - 1368720 | 19831.7 |
| riboflavin biosynthesis protein ribd | Rifp1Sym_bb00280 | Not Available | Positive | 1368717 - 1369838 | 39818.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
