Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | Rifp1Sym_az00320 | Not Available | Negative | 1297634 - 1300249 | 96004.2 |
| putative exported lysm bacterial cell wall protein | Rifp1Sym_az00330 | Not Available | Negative | 1300246 - 1301577 | 48810.0 |
| regx3: sensory transduction protein regx | Rifp1Sym_az00340 | Not Available | Negative | 1301654 - 1302394 | 28000.9 |
| hypothetical protein | Rifp1Sym_az00350 | Not Available | Negative | 1302391 - 1302537 | 4854.32 |
| peptidyl-trna hydrolase | Rifp1Sym_ba00010 | Not Available | Positive | 1302662 - 1303255 | 21806.1 |
| hypothetical protein | Rifp1Sym_ba00020 | Not Available | Positive | 1303354 - 1304109 | 28310.5 |
| abc transporter, involved in lipoprotein release, permease protein | Rifp1Sym_ba00030 | Not Available | Positive | 1304125 - 1305408 | 46290.9 |
| abc transporter, involved in lipoprotein release, permease protein | Rifp1Sym_ba00040 | Not Available | Positive | 1305363 - 1306613 | 46309.0 |
| abc transporter, atp-binding protein | Rifp1Sym_ba00050 | Not Available | Positive | 1306618 - 1307280 | 24277.1 |
| hypothetical protein | Rifp1Sym_ba00060 | Not Available | Positive | 1307213 - 1307461 | 9141.14 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
