Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endoglucanase y | Rifp1Sym_az00020 | Not Available | Positive | 1266700 - 1268022 | 49121.6 |
| hypothetical protein | Rifp1Sym_az00030 | Not Available | Negative | 1268272 - 1269567 | 46657.6 |
| hypothetical protein | Rifp1Sym_az00040 | Not Available | Negative | 1269564 - 1269992 | 15064.2 |
| type i secretion target repeat protein | Rifp1Sym_az00050 | Not Available | Negative | 1269902 - 1270783 | 29494.9 |
| phospholipid/glycerol acyltransferase | Rifp1Sym_az00060 | Not Available | Negative | 1270986 - 1271666 | 25327.6 |
| peptide deformylase | Rifp1Sym_az00070 | Not Available | Negative | 1271703 - 1272233 | 19923.9 |
| amino acid-binding act domain protein | Rifp1Sym_az00080 | Not Available | Negative | 1272237 - 1272749 | 17993.8 |
| hypothetical protein | Rifp1Sym_az00090 | Not Available | Negative | 1272749 - 1273495 | 26650.9 |
| ribosomal large subunit pseudouridine synthase d | Rifp1Sym_az00100 | Not Available | Negative | 1273492 - 1274469 | 36324.3 |
| putative component of the lipoprotein assembly complex | Rifp1Sym_az00110 | Not Available | Positive | 1274546 - 1275361 | 31012.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
