Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein involved in aromatic hydrocarbon degradation | Rifp1Sym_ay00160 | Not Available | Positive | 1244563 - 1245834 | 45359.9 |
| hypothetical protein | Rifp1Sym_ay00170 | Not Available | Negative | 1245938 - 1246417 | 17649.7 |
| putative sulfur transfer protein | Rifp1Sym_ay00180 | Not Available | Negative | 1246463 - 1246693 | 8167.8 |
| rhodanese family sulfurtransferase | Rifp1Sym_ay00190 | Not Available | Negative | 1246837 - 1247166 | 11914.4 |
| siroheme synthase | Rifp1Sym_ay00200 | Not Available | Positive | 1247334 - 1248758 | 52036.7 |
| rhodanese domain protein | Rifp1Sym_ay00210 | Not Available | Negative | 1248829 - 1249452 | 23669.2 |
| nitrate/nitrite response regulator protein | Rifp1Sym_ay00220 | Not Available | Negative | 1249467 - 1250114 | 23971.2 |
| nitrate/nitrite sensor protein narq | Rifp1Sym_ay00230 | Not Available | Negative | 1250115 - 1251785 | 61916.9 |
| multifunctional trna nucleotidyl transferase | Rifp1Sym_ay00240 | Not Available | Negative | 1251769 - 1252986 | 44576.4 |
| lipid a export atp-binding/permease protein msba | Rifp1Sym_ay00250 | Not Available | Negative | 1252953 - 1254740 | 67448.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
