Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor protein gacs | Rifp1Sym_ay00060 | Not Available | Negative | 1231681 - 1234539 | 105513.0 |
| hypothetical protein | Rifp1Sym_ay00070 | Not Available | Negative | 1234757 - 1234918 | 6100.73 |
| two-component system response regulator | Rifp1Sym_ay00080 | Not Available | Positive | 1235066 - 1237138 | 77426.3 |
| transcriptional regulator, crp/fnr family | Rifp1Sym_ay00090 | Not Available | Positive | 1237157 - 1237843 | 25714.1 |
| hypothetical protein | Rifp1Sym_ay00100 | Not Available | Positive | 1237981 - 1238169 | 6879.75 |
| putative permease perm | Rifp1Sym_ay00110 | Not Available | Negative | 1238219 - 1239289 | 39865.1 |
| hypothetical protein | Rifp1Sym_ay00120 | Not Available | Negative | 1239301 - 1239696 | 14875.8 |
| transcriptional regulator, lysr family | Rifp1Sym_ay00130 | Not Available | Negative | 1239693 - 1240607 | 34195.1 |
| putative response regulator | Rifp1Sym_ay00140 | Not Available | Negative | 1240994 - 1241596 | 22583.2 |
| multi-sensor hybrid histidine kinase | Rifp1Sym_ay00150 | Not Available | Negative | 1241583 - 1243934 | 87481.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
