Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Family
Genus
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=order&phylum=Pseudomonadota |
| Family | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=family&phylum=Pseudomonadota |
| Genus | /taxonomy?kingdom=Pseudomonadati&klass=Gammaproteobacteria&level=genus&phylum=Pseudomonadota |
| Species | endosymbiont of Riftia pachyptila |
| Strain | (vent Ph05) |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
721041 bp
Thymine Count
712297 bp
Guanine Count
1021414 bp
Cytosine Count
1026169 bp
Genome Length
3481040 bp
Protein-coding Genes
3182 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase flavoprotein subunit | Rifp1Sym_ax00360 | Not Available | Positive | 1220803 - 1222566 | 64578.9 |
| succinate dehydrogenase iron-sulfur protein | Rifp1Sym_ax00370 | Not Available | Positive | 1222487 - 1223278 | 30159.5 |
| putative kef-type k+ transport system, membrane component | Rifp1Sym_ax00380 | Not Available | Positive | 1223359 - 1224957 | 57922.9 |
| hypothetical protein | Rifp1Sym_ax00390 | Not Available | Positive | 1224991 - 1225164 | 6435.2 |
| hypothetical protein | Rifp1Sym_ax00400 | Not Available | Positive | 1225161 - 1225262 | 3805.79 |
| dihydrodipicolinate synthase | Rifp1Sym_ay00010 | Not Available | Negative | 1226945 - 1227829 | 31400.8 |
| galactose-1-phosphate uridyl transferase, class i | Rifp1Sym_ay00020 | Not Available | Positive | 1228018 - 1229106 | 41572.3 |
| glycine cleavage system transcriptional repressor | Rifp1Sym_ay00030 | Not Available | Positive | 1229191 - 1229733 | 19602.7 |
| thiol peroxidase, bcp-type | Rifp1Sym_ay00040 | Not Available | Positive | 1229745 - 1230221 | 17922.8 |
| putative atpase | Rifp1Sym_ay00050 | Not Available | Positive | 1230256 - 1231668 | 52733.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
